jbrowse-testing/gff-test/get-data.sh

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2023-01-29 13:45:24 -08:00
mkdir -p data && \
curl -OJX GET "https://api.ncbi.nlm.nih.gov/datasets/v2alpha/genome/accession/GCF_000157115.2/download?include_annotation_type=GENOME_FASTA,GENOME_GFF,RNA_FASTA,CDS_FASTA,PROT_FASTA,SEQUENCE_REPORT&filename=GCF_000157115.2.zip" -H "Accept: application/zip" && \
unzip -j GCF_000157115.2.zip ncbi_dataset/ ./ncbi_dataset/ && \
rm GCF_000157115.2.zip